BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008D09LP1|AL425857
(839 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1798 1620 0.0
>3x_Contig1798
Length = 38968
Score = 1620 bits (816), Expect = 0.0
Identities = 830/836 (99%)
Strand = Plus / Minus
Query: 1 gatcatcaaaataaatacccttcacaccatccgtgtgcccggtgagtcttctaatcaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8819 gatcatcaaaataaatacccttcacaccatccgtgtgcccggtgagtcttctaatcaaat 8760
Query: 61 taccagattttgtgtcccatatagccaccgttgaatcgtatgacccagtgaaaagcagtt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8759 taccagattttgtgtcccatatagccaccgttgaatcgtatgacccagtgaaaagcagtc 8700
Query: 121 tgtggttgaactttaatgacaataccccatccatatggcctttgaagagctgaattctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8699 tgtggttgaactttaatgacaataccccatccatatggcctttgaagagctgaattctac 8640
Query: 181 atcttccatttctccaattggattccacttggaaccgttccctatatattactttccagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8639 atcttccatttctccaattggattccacttggaaccgttccctatatattactttccagg 8580
Query: 241 gtctcgtatagtacctgctattcctagccctagcggcaacagtttggttgggagagttgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8579 gtctcgtatagtacctgctattcctagccctagcggcaacagtttggttgggagagttgc 8520
Query: 301 caggattgattagtgactttccgcctccaatttcattcccgttgccgtttgcaacatttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8519 caggattgattagtgactttccgcctccaatttcattcccgttgccgtttgcaacatttt 8460
Query: 361 ggaattgattgccgttttgattatggacatgtgcttyatttacaggtaagtwtcttgccc 420
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 8459 ggaattgattgccgttttgattatggacatgtgcttcatttacaggtaagtatcttgccc 8400
Query: 421 tcttcatatggagttagggtagaccccatccacagtttggacattttctatcaatatgct 480
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8399 tcttcatatggagtaagggtagaccccatccacagtttggacattttctatcaatatgct 8340
Query: 481 gttcgcacatatggtaccataccctatcgtcatcagctagtgttttccacctcttacatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8339 gttcgcacatatggtaccataccctatcgtcatcagctagtgttttccacctcttacatg 8280
Query: 541 ttagcgaggcgatgcaaagagactgacagttaaggtaacctaaaattttcaaagaaagtt 600
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 8279 ttagcgaggcgatgcaaagagactgacagtcaaggtaacctaaaattttcaaagaaagtt 8220
Query: 601 cctctggtaaggttgaaatgaaatcgatcttaatcaattgttttacctcatcagcaatat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8219 cctctggtaaggttgaaatgaaatcgatcttaatcaattgttttacctcatcagcaatat 8160
Query: 661 aagatagctggggaaaacaacaaagctgttatattccttccagcattaatcttcgtatct 720
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 8159 aagatagctggggaaaacaacaaagctgtaatattccttccagcattaatcttcgtatct 8100
Query: 721 tatcattgctatgctggaaattgtctagcgtttgtttgataattgctcggtctgattcct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8099 tatcattgctatgctggaaattgtctagcgtttgtttgataattgctcggtctgattcct 8040
Query: 781 tgtccaaagctttcattttctccatccacttctccgaccgtacctgatcttggaaa 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8039 tgtccaaagctttcattttctccatccacttctccgaccgtacctgatcttggaaa 7984
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6024
Number of Sequences: 1807
Number of extensions: 6024
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 839
length of database: 10,358,551
effective HSP length: 16
effective length of query: 823
effective length of database: 10,329,639
effective search space: 8501292897
effective search space used: 8501292897
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)